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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71278346, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKAIKSIF TLSACALAIN AATAQEQVTL EVIQVTAQKR SENAQETPIS MNVLSADDLK  60
   61 EKSIEKIDDL QYSVPNLHMT ETGISTQMFI RGIGTGNNQG FEQSVGQYID GVHYGRQQLL 120
  121 RMPFLDLERI EVLKGPQSIM FGKNSVAGAL NLSSAKPTQD TEIHLGLQYQ PTIGATEITG 180
  181 MVSGALTDTL SARLAVRDYS EDGYVENTFK DRDETIREES AVRLSLMWEP SDTMNFLFKV 240
  241 EQDEFDGTGR QIEVIRDEPS LAGSPIPGAT FSQILGALGH PNAISENELN YQRQADAEES 300
  301 NNNSLTNSTL TANFKLGDYT LTSVSGFVSY DFVETCDCDY TAAPIFSVFI DEEYEQFSQE 360
  361 IRLVSPLGEK FDWLGGLFYQ TSELGFDDNI KIPTNSVLGL LSGGALSPLT GHGAGRNYQL 420
  421 DTDMFSAFFQ GRYHFTEALT LTLGARFTSE EKTSSRIMNI TDLATGNITT NPMAPALFDA 480
  481 VFGIQSEQSP LSPQGHNLKG ERKENSFTPL INISYKIDQN IMAYASATTG FKAGGFDARA 540
  541 NNVNSWEFEE EEATAYEMGI KSLLLDDTLE INLSFYRTEY DNLQVSQFDG VLGFNVGNAK 600
  601 ETVVQGVEVD GRWIILDGLS MQYGVAYLDH EYKDFTNGNC HSRQVPDGDI GADGNQLCDY 660
  661 TGKSGQYTPK FTASIGFDYF TDISFLGFEY FRTTLGLYHS AKQNVDVNLN PLYEVDSYDK 720
  721 VDMRIALESE NWNIALFGKN MTNEEVLTYV GNNPLSGSTF GTDTFYGFVD RPAVYGIQLD 780
  781 YNF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle