YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71278219, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.86
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTDDDKANI NTSTGISNNN KTVRKLLLVV VAMFGFGFAL VPLYDVFCDI TGLNGKTNDT  60
   61 AATYEADGID KLRTVKVQFI TRNAKGIPWE FEPVINEISV HPGEMKLVSF YAKNNASHDI 120
  121 IGQAVPSVSP GLAANYFHKI ECFCFTQQPL AAGKEVEMSL QFYVDLELPA DINTLTLSYT 180
  181 LYDITEKSS

Type	Start	End	Confidence
Cytoplasmic	1	25	0.77
Transmembrane Helix	26	44	0.83
Non-Cytoplasmic	45	189	0.93