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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71278208, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSPVKKVVV LGGGTSGWIS AALLKKILGS AIQLELVESD AIGTIGVGEA TIPPIKHLNN  60
   61 VLGINEAEFL RETKATIKLG INFENWKSQG HSYLHSFGAA GKSLAFCHFH HLLKRANQLE 120
  121 DDSHLWQYDL NYLCAKAGKF AQIKSKDPII ELPYAYHFDA GLYAKFLRKF SEKIGVIRTE 180
  181 GLVEHVEQCP NSGHITSLKL KSGQTVTGDL FIDCSGFKGV LIQEKLRTGY EDWSHLLQCD 240
  241 RAIAVPSERL EKTLPYTRSI AHAAGWQWRI PLQHRNGNGL VYSSSHCSEQ QAMDTIMGNL 300
  301 DSKAIADPKV IKFQTGRRYQ QWNKNVIAIG LSSGFLEPLE STSIHLVQSA VVRLAHLFPH 360
  361 QGINSSLVDE FNKQSATEFE QIRDFLVLHY HATERTDSDF WQDMRHMKIP DSLAHKIEIF 420
  421 KQSGRLFREQ NDLFTDSSWL QVMLGQGIVP QDYHPIANIM SDEKLAEMLR KVKEIKQAPI 480
  481 DKLPSHDEFL RIFCQQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle