YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71143946, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVGIIMGSK SDWPTMQHTA EMLDSLGVQY ETKVVSAHRT PHLLAEYAES AKDRGIKVII  60
   61 AGAGGAAHLP GMAAAYTSLP VLGVPVQSKA LNGQDSLLSI VQMPKGIAVG TLAIGNAGAA 120
  121 NAGLLAAQII GTHNTEIQQN IEEFRRKQTE TILANPNPAE

Type	Start	End	Confidence
Cytoplasmic	1	57	0.84
Transmembrane Helix	58	77	0.70
Non-Cytoplasmic	78	106	0.78
Transmembrane Helix	107	130	0.67
Cytoplasmic	131	160	0.66