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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MSBA1_COLP3
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSPKTNAL SSSDSANATT WQNFKRLVSY AKPYKLGFVA AIIGMLGYAA IDVYFLSQLK  60
   61 PLVDEGLSGA NANFMKWAPL FIIVAFTVRG IAHFIANYCL AWVGNNVVAD LRQKLFEHIM 120
  121 SMPVAFHDQT STGSLISKIT FDTEQVLNSV SKSILTIVQQ SAFIIGLLGL MFYYSWQLSL 180
  181 IFLLITPIIA VIVSVVSKRF RKVSKNIQGA MGEVTTAAEQ TFNGHKVVLT FGGQQREFSR 240
  241 FAKINKHNRQ QRMKMRATKS ASVPIIQVIA SFALAFVFYA ITSDSLRDSI SPGTFVSIIT 300
  301 YMTMLLRPLK MLTNVNSEFQ QGMAACTSIF SILDHEKEKD NGDKQLERAS GTLSFKHVDF 360
  361 SYKNTNTMTT SDKEQDTKLA LNDITFDLAP GETLALVGRS GSGKSTASSL LLRFYDATRG 420
  421 EILIDDTNIE QFQLKDLRKQ FSYVSQQVVL FNDTLANNIA YGKPEATEAE IIEAAKSAHV 480
  481 MEFAEHMEQG LETNIGENGA LLSGGQRQRV AIARALLCDT PFLILDEATS ALDTESERHI 540
  541 QDALQTLQQN RTSIVIAHRL STIENADKII VMEQGKIVEQ GNHQSLLAKQ GAYAQLHSFQ 600
  601 FE

YRC Informatics Platform - Version 3.0
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