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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71143908, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKISLFLLLL TLSASPFTSG AQKSAQQNAL FPYPQQVSWG KETFTFNNET QLIYTNNDAK  60
   61 KVAHYFSDFI QPATGYLPSL LTTEEARLQY KLANSANKIA FLLLEKSSEE AVEGSYHLTI 120
  121 DANKVTASAS SEVGLFYAAQ TLRQLFSSDI ESRMPINKAQ WLLPSVDIID APRFKHRGMH 180
  181 LDVSRHFFDV TFVKRYIDWL AFHKINYFQW HLTDDQGWRI EIKQFPKLTS VGGHRAQTVV 240
  241 GHTYDYQSVF DNKSHGGFYT QAQIKEVLAY AKELHVEVIP EVGVPGHSTA FLAAYPEYSC 300
  301 HKNLVKVEQR FGIFEEVLCP TEDTFTMLAK VYQEVATLFP SKYIHIGGDE VIKKQWLESD 360
  361 FVQQLMKEQG LTNGEEVQSY FIKRVSQIIT GLDKTLIGWD EIIEGGIAKD AVIMSWRGIE 420
  421 GGIASSEAGH DVIMSPYQYT YLDAYQSRSV DEPKAIHGYL PLKMVYGYDP VPADLSPQHQ 480
  481 QHILGAQGAL WTEYIESPRH AEYMLLPRLS ALAEVFWTQP TNKNWSRYSA NVDHIITRYQ 540
  541 KMGLNPSTSA FTASTKIDVV KSGELTVNLT ADIAGKNIFY TIDGSEPAPY SKATYLYKNA 600
  601 ITVTQPVLIR VAVESAQGRT LFSEVNVALA PHKALGKKIS FAAPPKTGEE RLLDGIMAYQ 660
  661 QYYNVDDFAV FYDEDLDAII DFEQATEFSQ VQLGIDTGKH RQLQPPVSVE VLVSNDGINW 720
  721 QSLLRLTPTQ IKGPLLTLDF EQVKMQFLRV IAINAKNSTD PQIPKLPLYI DEIAVY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle