YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71143886, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNKKTTSIK RIALLTSGGD APGMNAAIRS VVLAAHHYHI EVIGFYHGYN GLVCEEHIAM  60
   61 AEPLTLLKVN SIIHLGGTIL KSARCQLMHE AKGLQLAADT LNDKNIDALV VIGGDGSFSG 120
  121 LLALQAYWSG QMIGIPGTID NDLDGTDYTI GFATAVNTGI EAIDKIRDTA DAFERIFIVE 180
  181 LMGRHCGHIT FNVGIACAAE QVLSFENFNA NEQSSKLQQL ATEITTAKKN RHSSYIIVIA 240
  241 ENLWPGGAVE LARQLHLQAD IECTPCILGH IQRGGSPIAK DRILATKMGV AAVQALIDGE 300
  301 SNIMVAEQNN AMNFITLDEA IKHKKVVSKQ LIDAQQNILA LTAQTQC

Type	Start	End	Confidence
Signal Peptide	1	26	0.71
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	347	0.99