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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71143852, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYRIMSDNE VPKNTLSDNS DTEKKQDATL PPSSTANKTS ATENDNADTK KATLSKPEPK  60
   61 KSTASAGARK PSPSNTQETA DKPSNKTAII ALVIASVSIF ASIGHYVWQQ QQSSAQLLTL 120
  121 NQQNQQAIQQ SQAQLKNSLT AEFSRQLQQQ HRTTSQSQES AKKAHLDSDT QLQQLTTQIR 180
  181 QLEQQVSLRQ PNDWLIHEAE YLVRVAARTM WLERDTKAAI NLLRDADNRL KELDQPKFLP 240
  241 VRALINEDIE SLALMPTLQN QEAILTLMAL NKQVPTLMLA GVNLTEALDQ TTEDLALSDN 300
  301 IGDWQENLAK TWHKFLNDFI TVRRRTGMVE PLMAPDQQQH LKQNLSLKIQ LVQWAASEQK 360
  361 EEIYQQTLLD IQQWLNEFFD MNSPVNKRFY QSIEQLKQQT IHYDYPSDLR SLAAIKRLLQ 420
  421 DSKQVTKPQT SKSKSVKVEQ TEKQVVEQLA EPSSAPKDSP KPESEKASGG QL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle