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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71143736, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRRNFLKGI LATSFTVIST ASVLTPLTAL AKIGAKNRDD WLTTGSHFGA FKMKRKNGVI  60
   61 DQVKPFDLDK YPTDMINGIK GLVYNPSRIR YPMVRLDFLL KGHKSDTSQR GDFRFVRVTW 120
  121 DQALTLFKQS LDEIQTNYGP SGLHAGQTGW RATGQLHSCT SHMQRAVGMH GNFVKKIGDY 180
  181 STGAGQTILP YVLGSTEVYA QGTSWPLILD NAKTIVLWAN DPYKNLQVGW NAETHESFEY 240
  241 LAQLKEKVKK GEIRVISIDP VASKTQDYLG CEKIYVNPQT DVALMLAIAY ELYTNDLHDK 300
  301 DFIKGYSLGF ERFVPYLTGE EDGIAKTVEW AEKITAVPAD VIKELAKTMV AGRTQLLMGW 360
  361 CIQRQQHGEQ PYWMAAVLAT MIGQIGLPGG GISYGHHYSG IGVPSSGAAA PGAFPRNVDE 420
  421 GQKPIFDSTD FKGASSTIPV ARWIDAILEP GKVIDANGAK VTYPDIKMMI FSGNNPWNHH 480
  481 QDRNRMKKAF HKLECVVSID INWTATCRFS DIVLPACTTM ERNDIDIYGS YANRGLLAMQ 540
  541 KMVEPLFDSL SDYEIFTRFA KVLGKEKEYT RGMNEFDWLT KLYNDCKKAN DGKFVMPEFE 600
  601 QFWQDGYVHF GEGKPWTRHA AFREDPEINP LGTPSGMIEI HSRKIERYQY DDCKGHPTWM 660
  661 EKSERSHGGP GSDKHPIWMQ SCHPDKRLHS QMCESKEYRD TYTVQDREPV YLNPADAKHR 720
  721 GIKNGDVVRV FNDRGQLLAG AVVSANFPEG VIRIHEGAWY GPVGDDGSIT GGAKVGAICS 780
  781 YGDPNTLTQD IGSSKLAQAC SAYTCLVDYE KFSGKLPPVT SFQGPLEIGA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle