YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71143713, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLYHFGLGE LPFTLTPNTN FYLPMAMHDE ALAVLSTALQ TGEGFIKVVG EVGTGKTLLC  60
   61 RKLLNEIPDH FVTAYIPNPY LNPDELRRAV AVELGVKQAQ RMSVQLLTQR IQTRLLELHN 120
  121 QGHSVVLILD EAQALPEDSL EALRLFTNLE TETRKLLQVV LFAQPELDVR LAKTEFRQLR 180
  181 QRITFAYKLR PMNANEVQQY IQHRLQVAGY NGAVLFPVKI CQSIARVSKG VPRLVNVLCH 240
  241 KMLMLAYGQG HYKMTMKLLK AAVKDTESIE QSSKVSLLAF SFLGGLSVLL LAYYALVVKL 300
  301

Type	Start	End	Confidence
Non-Cytoplasmic	1	276	0.79
Transmembrane Helix	277	297	0.95
Cytoplasmic	298	300	0.69