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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71277825, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNFLMKKII YSGVLSIHFI LAFVVNSVGA AQLKKSSTLS MNVLFITIDD LNNDLGAYGH  60
   61 HLVKSPNIDA LAKKGIRFDK AYSQSPMCTP SRSSFMTGLY PDQTGIIAHG SHTQMTAHFR 120
  121 EHIPKVTTLP QLFKNNGYFS GRVGKIYHQG VPNQIGTSGA DDAASWHETV NPIGLDKDVE 180
  181 DKIIAFNEKA LVRQSFGGVL SFLAIGDDDK AHTDGKVATE TINMIKDHHP DKTGKPFFIG 240
  241 AGFYRPHTPF VAPKKYFDLY PLEKIKPYIA PKNDRKDIPD IALQDREGQV GLTLNQRKQI 300
  301 IQGYYAAVSY VDAQVGRVLD ALKQQDLSDN TIVVFLSDHG YELGQHGLWQ KGSLFEGSAR 360
  361 APLIIYAPNV KDNGRVVTSP VELVDIYPTL AKLTGLVAPE YLAGKDLTPA LNDVDFQVRK 420
  421 GAYSAILNRN KGDNNQFAFT KIRGHSIRTN RYRYTEWGEG YFGAELYDHK NDPQELKNLA 480
  481 DKVSLESVRI KMKWLLNDAM DDAQKRIKSI E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle