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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71143533, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLKKVLTG SLLISLLVIA TASTWLYSKI DGALPVLNGE KTVFGLKKSA IIERDKQGIV  60
   61 TIKAQNRSDI AVALGFVHAQ ERFFQMDLLR RNSAGELASL FGIRALDYDK SIRKHRFRER 120
  121 ARAIAAQLPR QELELIKAYT RGVNQGLKYL NSSPFEYLLL QQEPVQWSEE DTILTVFSMY 180
  181 IDLQYHDGRR ERTLGLMKAV LSGDVYAFLD PKGSIWDAAI DGSQFSQAPM PTDAWPAASS 240
  241 FNIDNKNRNN TKLANLNKDK YQGDHLPGSN SWAISGALST TGSAVIANDM HLGLRIPNTW 300
  301 FRASFEYPAT TPDRSITAKD LIKVTGATLP GTPNIVIGSN GNIAWGFTNS YGDYSDVILL 360
  361 TTNPDNSQYL TPSGYQNFTT HKQIIAVKGQ KAQEITVTET IWGPVIGKNH QGKLLAYRWV 420
  421 AHDKEAINLV ATELEQAQNV SEAFNIAARS GIPSQNMLIA DKHGDIGWTI IGPIPNKNGM 480
  481 IGETPKSWAS GENSWQGYLS SAQYPKIINP ENHRLWTANS RVVGGDMYKK LGNGGYALGA 540
  541 RSKQVRNNLF ALKEFDEQSL LNIGLDDEAI FLQRWQQFIL DDVLTKSVVA KDKSFKQIKK 600
  601 LLESAPKLRA SVDSVSYRLV RNFRINIRDS VFLELNKSLN KIDEAFNFKS IRHQIEVPLW 660
  661 QLINEQPENF MMLGESSWQD LFIKALEVTI ADMTVNQTLD TATWGQQNSS VIKHPLSSAL 720
  721 PFLNHWLDMP SKALAGDSYM PRVQGKSFGA SERMVVSPGY EKNGIFHMPT SQSGHPWSPY 780
  781 YGMGHSDWEN GIASSFLPGK TLYKLTLLSY 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle