YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74474895
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTKFTSLAL VGTLLGTLAL AGCGQEEKDP NHIKVGVIVG AEQQVAEVAQ KVAKDKYGLN  60
   61 VELVTFNDYV LPNEALNKGD IDANAFQHKP YLDQQIKDRG YKLVAVGNTF VYPIAGYSKK 120
  121 IKSLNELQDG AQIAIPNDPT NLGRSLLLLQ SVGLIKLKDG IGLLPTVLDI TENPKHLKLV 180
  181 ELEAPQLPRS LDDNQIALAV INTTYASQIG LTPAKDGIFV EGKDSPYVNL IVAREDNKDA 240
  241 ENVKKFVQAY QSDEVYNAAN KIFNGGAVKG W

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	271	0.99