YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|147905374, gi...
Protein type: Transmembrane
Type Confidence: 0.68
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MITSAAGILS LLDEDEPQLK EFALHKLNAV VNDFWAEISE SVDKIEVLYE DENFRSRQFA  60
   61 ALVASKVFYH LGAFEESLNY ALGAGDLFNV NDNSEYVETI IAKCIDHYTK QCVENAELPD 120
  121 GEKKPIDGRL EGIVNKMFQR CLDDHKFKQA IGIALETRRL DVFQKTILQS NDVPGMLAYS 180
  181 LKVCMSLMQN KQFRNQVLRV LVKIYMNLEK PDFINVCQCL IFLDDPQAVS DILEKLVRED 240
  241 NLLMAYQICF DLYESASQQF LSSVIQNLRT VGAPIPSVPG STNTGTVPGA SADSETMESE 300
  301 DQASITVGSN ATESNPEPKD QISKMVKILS GEMAIELHLQ FLIRNNNTDL MILKNTKDAV 360
  361 RNSVCHTATV IANSFMHCGT TSDQFLRDNL EWLARATNWA KFTATASLGV IHKGHEKEAL 420
  421 QLMATYLPKD TSPGSAYQEG GGLYALGLIH ANHGGDIIDY LLNQLKNASN DIVRHGGCLG 480
  481 LGLASLGTAR QDVYDLLKTN LYQDDAVTGE AAGLALGLVM LGSKNAQAIE DMVGYAQETQ 540
  541 HEKILRGLAV GIAMVMYGRM EEADALIESL CRDKDPILRR SGMYTVAMAY CGSGNNKAIR 600
  601 RLLHVAVSDV NDDVRRAAVE SLGFILFRTP EQCPSVVSLL SESYNPHVRY GAAMALGICC 660
  661 SGTGNKEAIN LLEPMTNDPV NYVRQGALIS SALIMIQQTE ITCPKVSQFR QLYSKVINDK 720
  721 HDDVMAKFGA ILAQGILDAG GHNVTISLQS RTGHTHMPSV VGVLVFTQFW FWFPLSHFLS 780
  781 LAFTPTCVIG LNKDLKMPKV QYRSNCKPST FAYPAPLEVP KEKEKEKVST AVLSITAKAK 840
  841 KKEKEKEKKE EEKMEVDETE KKEEKKKEPE PNFQLLENPA RVMPAQLKVL SMPEGSRYQP 900
  901 FKPLSIGGII ILRDTSEEEE QLVEPVAAHG PKIEEEEQEP EPPEPFEYID D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle