YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|87162512
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIRKAAKIS PLLFTCSSSL LQNDSLPVEP FQMHVCQLNQ SPWDVIPFHF DKSSIQFEDS  60
   61 LAALDESVAS MMETDIVDID NKPVIENSSI MAIDNNQQCD GNKKVVNNNG GCNTGLKRNS 120
  121 NGGGDIEAPR RGRGRPKKVK ADSASGSNNN EFYFYSGFGP PRGKRRGDKN DGEDNKSVVA 180
  181 LGTSSHDVKV NVGVDIVPCS EGLNYFEDYE DEYDDDNGKR RMRKPVKERS LKSLM

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	235	0.98