YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71681032
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVHRGSARA APASDKVQKN KPAQTSGLKQ GSRMAKIFGF EWADLSSWQS VVTLLNRPTD  60
   61 PANLAVFRFL FAFLMLLDIP QERGLSSLDR KYLDGLDVCR FPLLDALRPL PLDWMYLVYT 120
  121 IMFLGALGMM LGLWYRLSCV LFLLPYWYVF LLDKTSWNNH SYLYGLLAFQ LTFMDANHYW 180
  181 YPDRSTPEKT KAKHSCFQIL QGCRLYFLCV SPERQNYSQT QKLL

Type	Start	End	Confidence
Cytoplasmic	1	115	0.81
Transmembrane Helix	116	138	0.86
Non-Cytoplasmic	139	159	0.64
Transmembrane Helix	160	181	0.59
Cytoplasmic	182	224	0.77