YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37790786
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVTLALAV SLAAYAAYYY VHIAEAQPIG SLVLAAPHSQ QQQPGSSTSD EATINHLQQQ  60
   61 HQRLKDTNVY RARSKMRPHD RKYPGVIGAY EAYRRTVQGP QLMQRNPATA DRFADDPGVD 120
  121 EQDQMRFSLE GFLTGARTPT LLNDDEEEEE DEDHEQGGDG LVKRFDDYGH MRFGKRGGEG 180
  181 DQFDDYGHMR FGR

Type	Start	End	Confidence
Signal Peptide	1	16	0.99
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	193	0.99