YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71297300
Protein type:	Transmembrane
Type Confidence:	0.59
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYGRRTSVR FRSSGMTLDN ISRAAVDRII RVDHAGEYGA NRIYAGQMAV LGRTSVGPVI  60
   61 QKMWDQEKDH LKKFNELMVM FRVRPTVLMP LWNVLGFALG AGTALLGKEG AMACTVAVEE 120
  121 SIAHHYNNQI RTLMEEDPEK YEELLQLIKK FRDEELEHHD IGLDHDAELA PAYAVLKSII 180
  181 QAGCRVAIYL SERL

Type	Start	End	Confidence
Cytoplasmic	1	85	0.50
Transmembrane Helix	86	106	0.53
Non-Cytoplasmic	107	194	0.86