YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71089835
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATATAISCR VSGEASAILA PSASSLPAPL RRAANSKGCF RAFPRGTSSR LMLTLGRLRV  60
   61 ERQSCLVRSS ACSALSRRDF SPVTQDMDGF LHSIVNMGFL DRLKLAWEII FPAPTIHENT 120
  121 NASIAKQRLK MILFSDRCEV SDEAKKKIVE SVVEALSEFV EIESRDNVQV DISTDAGLGT 180
  181 VYSVTVPVRR VKPEYQESEE QYGGKIVGVD FKDTGESSGN VDVTFDFYVP NENH

Type	Start	End	Confidence
Signal Peptide	1	33	0.69
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	234	0.99