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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71748872
Protein type: Globular with Signal Peptide
Type Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMATCIRNN LSPLLSRCWS CAALRQRQRR GLLFSAVTRR VINSHAAAAC YSARCYSQRH  60
   61 RSEVHGPLCS NLRPSVNSPF TTTTEQSTKA PRTMSASNCR GEAELLQVLQ SLGLSLPTIS 120
  121 HEEKHTVEEA NKELGRFEVP CIGTKNLFLK SSKGELVLVS ALHTTKTNMK TVQNAMKTKD 180
  181 LRFASEDLLL EKLGVVQGSV TPFALVNNGA KDVKVALDKA LVDSTLPVVF HPCRNDKSTL 240
  241 ITPTQLQDFL QKIDFPYIVV DFSEKATTAP ATTDAKKTKV APGPSVGEAK GDTKGETKLG 300
  301 IMASRRDNFS QWYTEVITKA EMIEYYDVSG CYIMRPWSFF IWKSVQKFFG SRIEAMGVED 360
  361 CYFPMFVSKT CLEREKDHIE GFAPEVAWVT KAGESDLEVP VAIRPTSETV MYPYYAKWIR 420
  421 SHRDLPVRLN AWNSVVRWEF SHPMPFIRTR EFLWQEGHCA WQTEEECSRE VLEILDHYAA 480
  481 VYTDLLAVPV VKGKKTEKEK FAGGYYTTTV ETYIAAVGRG CQGGTSHNLG QNFGKMFNIC 540
  541 FQDPDKNDDS TLIPWQNSWG LSTRVIGVTI MVHGDDRGIV LPPRVACLQV VIIPVGITKD 600
  601 TRQEQRNVLL DGCKALEGEL RTAGIRVKAD LRNNYSPGWR FNHWELKGVP VRVELGPKEM 660
  661 ETKQLSLVLR CDGQRRSVPW DGRIAETMSD LLNEIHNIMF QRASKEAEEN RKKITRWDDF 720
  721 TAAINNKSLV LAPWCGAESC EDQVKKDSAE ESKALQTQEE REDARAPSMG AKALCIPFEQ 780
  781 PESVEGKKCI CRSCDKPAQK WVLFGRSY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle