YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83594729, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRQLVSRSR VSGRRLIPLI VAGLLASAPV PGLIAQAEAK DVTLLNVSYD PTRELYKAVN  60
   61 AAFAESWKAK TGDTVIINTS HGGSGKQARA VIDGLEADVV TLALASDIDA IATHTKRLSP 120
  121 DWQKRLPDAS SPYTSTIVFL VRKGNPKGIH DWDDLVREGV QVITPNPKTS GGARWNHLAA 180
  181 WGYAEQKFGG DQAKVKDFIK TLYKNVPVLD TGARGSTTTF VKRGLGDVLL AWENEAFLAI 240
  241 EELGPNQFDI VVPSLSILAQ PPVALVDGEV DRHGTREVAQ AYLEFLYTPA AQKIIAHNFY 300
  301 RPVNREAADP ADIARFPEVK LLTIDDPVFG GWTKAQKEHF DEGGLFDQIY QPGG

Type	Start	End	Confidence
Signal Peptide	1	37	0.98
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	354	0.99