YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83594201, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPADDPPSID VHAPDPVPRR HGRRLSEILT GLAEDPSRER ISIADLIASM RDRTLGALMV  60
   61 LFALPNVLPT PPGTSAILGM PLIILAAQMT VGLSPWLPKL IAERSINRGD FAAIVTRAVP 120
  121 WLNRAEKLLS PRLTILTHPP AENIVGFVCL VLAIVLALPI PLGNMLPALA ICCFSLGILE 180
  181 RDGVWVIAGL VTAVASVALV WGVFYTVIKG AFFLIANAFS

Type	Start	End	Confidence
Cytoplasmic	1	49	0.94
Transmembrane Helix	50	69	0.76
Non-Cytoplasmic	70	75	0.63
Transmembrane Helix	76	98	0.83
Cytoplasmic	99	142	0.77
Transmembrane Helix	143	163	0.84
Non-Cytoplasmic	164	183	0.55
Transmembrane Helix	184	208	0.87
Cytoplasmic	209	220	0.64