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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83575348, gi|...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLSRNLLLW IIIAVLLVVL FNLFQTSAPR GPQTTVPYSD FLSSVDAREV RDVVIKGDSI  60
   61 SGHTTDGRAF TTYAPRDADM VSHLRDSGVQ ISAVPAEDNV PTFWSILISW FPFLLLIGVW 120
  121 IFFMRQMQSG GGKAMGFGKS RAKLLTEKTG RVTFDDVAGI DEAKQELEEV VEFLRDPQKF 180
  181 QRLGGKIPKG VLLVGPPGTG KTLLARAIAG EANVPFFTIS GSDFVEMFVG VGASRVRDMF 240
  241 EQGKKNAPCL IFIDEIDAVG RHRGAGLGGG NDEREQTLNQ LLVEMDGFEA NEGVILIAAT 300
  301 NRPDVLDPAL LRPGRFDRQV TVSNPDIMGR EKILKVHMRK TPLGPDVDAK VIARGTPGFS 360
  361 GADLSNLVNE AALLAARKGK RVVTMAEFEE AKDKVLMGAE RRSMVMTEDE KEKTAYHEAG 420
  421 HALIAIHQEG HDPLHKVTII PRGRALGVTM SLPERDRYGY SLKELKARIA MAFGGRVAEE 480
  481 MIYGTENVTT GASNDIMQAT DLARRMVTEF GFSEKLGPLR YTDNQEEVFL GHSVTQHKNL 540
  541 SDETARMIDE EVRRFVEQGE ARAREILGKY KDELEIITRG LLEYETLSGD EVNKLLRGED 600
  601 LNRAEQPAPP RDRSGRRASV PTSGPAAGGV GGDPEPQPGA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle