YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|223461521, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVSSELFSN GCTSWQRVLL TAFLLTCWHL PTTARVTIES FPPQVVEGEN VLLRVDNMPE  60
   61 NLLVFGWYRG MTNLRHAIAL YYSLTAKGLK HSGRETLYIN GSLWIQNVTQ EDTGYYTFQT 120
  121 ISKQGEMVSN TSLYLHVYSS LFICGRSTTL EGPTIELVPT SVAAGGSVLL LVHNIPKYLQ 180
  181 SLFWYKGLIV FNKVEIARYR RAKKSREPGP AHSGRETVYR NGSLLLKNVT WKDTGFYTLR 240
  241 TLTRYQKMEL AHIYLQVDTS LSLCCDTLDS AQLSIDPVPQ HAAEGGSVLL QVYNLPEGLQ 300
  301 TFSWYKGVLS TQDFKIAEYS IATKSIIRGR AHSRREIGYT NGSLLLQDVT EKDSGLYTLV 360
  361 TIDSNMRVVT AHVQVNIHKL VTQPAMRVTD STVRVQSSVV FTCFSYNTGI SIRWLFNNQN 420
  421 LQLTERMTLS PSKCQLRIHT VRKEDAGEYQ CEAFNPVSSK TSLPVRLTVM NE

Type	Start	End	Confidence
Signal Peptide	1	34	0.66
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	472	0.98