YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|242332547, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVSSELLSN GWTSWQRVLL TASLLTCWFL PITARVTIES VPPKLVEGEN VLLRVDNLPE  60
   61 NLRVFAWYRG VIKFKLGIAL YSLDYNTSVT GPEHSGRETL HSNGSLWIQS ATREDTGYYT 120
  121 FQTISKNGKV VSNTSMFLQV YSSLFICGRP SPPALLTIES VPASVAEGGS VLLRVHNLPE 180
  181 HLQSLFWYKG LTMFNKVEIA RHRTAKNSIE MGPAHSGREI VYSNGSLLLQ NVTWKDIGFY 240
  241 TLRTLNRYSR IELAHIYLQV DTSLSSCCDA FNSVQLRIDP VPPHAVEGES VLLQVHNLPE 300
  301 DVQTFLWYKG VYSTQDFKIA EYSIVTESII SGRAHSGREI GYTNGSLLLQ DVTEKDSGFY 360
  361 TLVTIDSNAK VETAHVQVNV NKLVTQPAMR VTDSTVRVQS SVVFTCFSDN TGVSIRWLFN 420
  421 NQRLQLTERM TLSPSKCQLR IHTVRKEDAG EYQCEAFNPV SSKTSLPVSL AVMNE

Type	Start	End	Confidence
Signal Peptide	1	34	0.66
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	475	0.98