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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70724999, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSTNLCRV TLGVEGMTCG SCVQSIEGRI GGLPGVIHIQ VSLEQNNATV TYDHTQHTPQ  60
   61 SIADAIEDMG FESSLTNATS TPVQTETKVF SKAGCSADSV QQALSTLAQI KGVIETQESA 120
  121 DNQGLAVTFV PSLVSEDQLG EVLKCLAPDT ACRPPLSPKE GSTSRSFSGV EAVKMRIEGM 180
  181 VCLSCTTTIE GKIGKLKGVE KIKVSLESQE AAVVYLPYII TVDEIVKQIE VAGFKATVKS 240
  241 KPRQLKLSAS EVERLLSAPK QTEEKLSEPP ADSTVTTLFQ VTGMHCNSCV VNIQDNISKL 300
  301 PAVTSVVVSL ENRQASIQHN PKQVSVVELQ KAIEALPPGN FKAIIPASPE PGFLQPLVSV 360
  361 AEIHIEGMTC GSCVQSIEGT LSQKKGVRSA QVSLANHQGT FEYDPLLTSP EELRAAIEDM 420
  421 GFDAFLPETN SLVPSVVKSP SPSVRSSSLS PVRSAVKENE AESDAEPSTN TISKCFIQIG 480
  481 GMTCASCVAN IERNLKNEYG IHSVLVALMA SKAEVRYSPS VIDPLRIAEL IRELGFTATV 540
  541 MDNYDGSDGS LELVVRGMTC ASCVHKIESN LMKQKGILYA SVALSTNKAH IKYDPEVTGP 600
  601 RDIIRLIENM GFTASLVKKD RPGSHLDHSR EIRQWKRSFQ ISLFFCVPVM GMMIYMIVVD 660
  661 HMIDKYHQHH NATAEDRAKY HSTMFLEKQL LPGLSIMNLI SFLFCVPVQF IGGRYFYCQA 720
  721 YKAVKHRTAN MDVLIVLATT IAFTYSVVVL LVAMVERAKV NPITFFDTPP MLFVFISLGR 780
  781 WLEQIAKSKT SEALSKLMSL QATEATVVTL NEDMSVLSEE QVDVELVQRG DVVKVVPGGK 840
  841 FPVDGRVIEG HSMADESLIT GEAMPVTKKP GSTVIAGSIN QNGSLLIKAT HVGTDTTLSQ 900
  901 IVKLVEEAQT SKAPIQQFAD KISSYFVPFI VVISVLTLLA WIIIGFVNFS LVQTYFPGYD 960
  961 KSISEAEAVI RFAFQASITV LCIACPCSLG LATPTAVMVG TGVGAQNGIL IKGGEPLEMA1020
 1021 HKIQSVVFDK TGTITYGAPK VVQVKMLAEG NRLPRSKLLA IVGTAENSSE HPLGAAITKY1080
 1081 CKQELGTESL GTCTDFQAVP GCGIRCLVSN TENLLKREDS DSEENQHNAV LIQISDARAH1140
 1141 STEHPLIMDP QPLTVVQTAS YTVLIGNREW MRRNALQVRA DVDEAMTEHE RRGCTAVLVA1200
 1201 VDNELCAMVA IADTVKPEAE LAVHVLSAMG LEVVLMTGDN SKTARAIAAQ VGIRKVFAEV1260
 1261 LPSHKVAKVE QLQQAGKRVA MVGDGVNDSP ALAMADVGIA IGTGTDVAIE AADVVLIRND1320
 1321 LLDVVGSIDL SKKTVKRIRI NFVFALMYNL VGIPIAAGVF MPVGLVLQPW MGSAAMALSS1380
 1381 VSVVLSSLLL KCYTKPTVEK LKRRLGDVRT HGSLSDVSVH IGMGELRRPS PKLSLLDRFV1440
 1441 NYSRASINSL RSDKHSMNSM ALSEPDKHSL LVGDDHCDNE IV

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Created and Maintained by: Michael Riffle