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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70734326, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPAM  60
   61 ADATYIEPIK WQTVAKIIEK ERPDALLPTM GGQTALNCAL DLEREGVLEK FGVEMIGANA 120
  121 DTIDKAEDRS RFDAAMKSIG LACPRSGIAH SMEEANAVLD KLGFPCIIRP SFTMGGTGGG 180
  181 IAYNREEFEE ICARGLDLSP TKELLIDESL IGWKEYEMEV VRDKKDNCII VCSIENFDPM 240
  241 GVHTGDSITV APAQTLTDKE YQILRNASLA VLREIGVETG GSNVQFGICP NTGRMVVIEM 300
  301 NPRVSRSSAL ASKATGFPIA KVAAKLAVGY TLDELSNDIT GGKTPASFEP SIDYVVTKLP 360
  361 RFAFEKFSKA DARLTTQMKS VGEVMAIGRT FQESLQKALR GLEVGVCGLD PKLDLSNPES 420
  421 MNVLKRELTV PGAERIWYVA DAFRAGMTVE QIFGMNMIDP WFLVQIEDLI KEEEKVKTLG 480
  481 LSAIDRDLMF RLKRKGFSDQ RLAKLLGVTE KNLRTHRQKL EVFPVYKRVD TCAAEFATDT 540
  541 AYLYSTYEEE CEAAPSTRDK IMILGGGPNR IGQGIEFDYC CVHAALALRD DGYETIMVNC 600
  601 NPETVSTDYD TSDRLYFEPV TLEDVLEIVR VEKPKGVIVQ YGGQTPLKLA RALEAAGVPI 660
  661 IGTSPDAIDR AEDRERFQQM VERLNLRQPP NATVRSEDEA IRAAAKIGYP LVVRPSYVLG 720
  721 GRAMEIVYEE DELKRYLREA VQVSNDSPVL LDHFLNCAIE MDVDAVCDGT DVVIGAIMQH 780
  781 IEQAGVHSGD SACSLPPYSL PAHIQDEMRE QVKKMALELG VVGLMNVQLA LQGDQIYVIE 840
  841 VNPRASRTVP FVSKCIGVSL AMIAARVMAG KTLKELGFTK EIIPNFYSVK EAVFPFAKFP 900
  901 GVDPILGPEM KSTGEVMGVG DTFGEAFAKA QMGASEVLPT GGTAFISVRD DDKPLVAGVA 960
  961 RDLINLGFEV VATAGTAKLI EAAGLKVRRV NKVTEGRPHV VDMIKNDEVT LIINTTEGRQ1020
 1021 SIADSYSIRR NALQHKIYCT TTIAAGEAIC EALKFGPEKT VRRLQDLHAG LKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle