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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70734212, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPESTTFDLP IAGMTCASCA GRVERALGKV AGIRTVSVNL ATEQARVEAP QDSLPALLEA  60
   61 VENAGYSVPV QAVELSIGGM TCATCAGRVE RALNKLPGVR SASVNLATER AHVELLGQVD 120
  121 PTLLVNAVTQ AGYSASLWQA EQKQGDEQKQ NLRRERWSLV LAILLALPLV LPMLVQPFGL 180
  181 HWMLPAWAQF ALATPVQFIF GARFYVAAWK AVRAGSGNMD LLVALGTSAG YGLSLYEWAT 240
  241 AAAGSMPHLY FEASAVVIAL VLLGKYLESR AKRQTASAIR ALEALRPERA IQVIDGREQE 300
  301 VAISALRLGD LVLVKPGERF PVDGEVIEGQ SHADEALISG ESLPVPKQPG DKATGGAING 360
  361 EGRLLVRTLA LGAETVLARI IRLVEDAQAG KAPIQKLVDK VSQVFVPTVL VLALITLVGW 420
  421 WLYGAPLETA VINAVAVLVI ACPCALGLAT PTAIMAGTGV AARHGILIKD AEALERAHEV 480
  481 SSVVFDKTGT LTSGTPRIAH MQAVEGDENS VLQLAGALQR GSEHPLAKAV LDLCQERQLP 540
  541 VADVSASQSL TGRGIAGTLE GRQLALGNRR LLEESGLNPG DLAQAARDWE HEGRTLSWLI 600
  601 EQSPQSRVLG LFAFGDTLKP GALQAVQQLN ARHISSHLLT GDNRGSAKVV ADALGITDVH 660
  661 AEVLPADKAA TVAELKKTGV VAMVGDGIND APALAAADIG IAMGGGTDVA MHAAGITLMR 720
  721 GDPRLIPAAL EISRKTYAKI RQNLFWAFVY NLIGIPLAAF GLLNPVLAGA AMALSSVSVV 780
  781 SNALLLKTWK PKDLENAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle