YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68348474, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGFNLSVTY FAQTSVIVLA IAENWTVIKS FRHSRRVLTT APDNKEQPMA TLLVLHGPNL  60
   61 NLLGTREPGV YGATTLAQIN QDLEQRARDA GHHLQYLQSN AEYELIERIH AARDEGVDFI 120
  121 LINPAAFTHT SVALRDALLA VSIPFIEVHL SNVHKREPFR HHSYFSDVAV GVICGLGASG 180
  181 YRLALEAALE QLERQANA

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.78
Transmembrane Helix	8	28	0.74
Cytoplasmic	29	163	0.78
Transmembrane Helix	164	185	0.60
Non-Cytoplasmic	186	198	0.65