YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PSD_PSEF5
Protein type:	Globular with Signal Peptide
Type Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRLFIISQ YLLPHHLLSR LAGCIAECRV RWFKNAFTRW FAKQYQVDMS EAQVEDVTAY  60
   61 EHFNAFFTRA LKDGARPLDP TPGAVLSPAD GAVSQLGPIE HGRVFQAKGH SYSVLELLGG 120
  121 DPALAQPFMG GDFATIYLSP KDYHRVHMPL AGTLREMVYV PGRIFSVNQT TAENVPELFA 180
  181 RNERVVCIFD TERGPMALVL VGAMIVASIE TVWAGLVTPP KRELKTVRYD EAARAPIHLE 240
  241 KGAEMGRFKL GSTAIVLFGP DQVQWAQELA AGSPVRMGQG LGLGLPKA

Type	Start	End	Confidence
Signal Peptide	1	22	0.62
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	288	0.82