YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70733671, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIIRTRQRP FMVIVDVVLT VLAWVGLLYL LVRGLIPLLD SHEGPRIEAG MLDALTTLQF  60
   61 YAWVAVLNAV LLISWARYRQ RRNKSYPPRL PAPVVDDKRL SETFKLNDAT FAQMRQPGTM 120
  121 IVHNDEEGGI SHVTTQFYRI LPEDQQHPPL RVEPPPRVIH LRSEGDEGKK TGED

Type	Start	End	Confidence
Cytoplasmic	1	11	0.92
Transmembrane Helix	12	32	0.94
Non-Cytoplasmic	33	56	0.89
Transmembrane Helix	57	76	0.91
Cytoplasmic	77	174	0.99