YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70733644, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASASAASI AAQAFEIRPL NGAVGAEIVG LDLSRPVNDQ DFARIHRAHL DHHVVVFRDQ  60
   61 RISPEQQIAF SRRFGVLQIH VLKQFLLAGH PEILIVSNII ENGQSIGLGD AGKFWHSDLS 120
  121 YKELPSLGSM LHAQELPAEG GDTLFANMHQ AWDNLPEALR KAVEGRSAAH SYTARYSETK 180
  181 FEGNWRPTLT PEQLAQVAEV VHPVVRTHPE NGRKALFVSE GFTTRIVGLP EDESAQLLAE 240
  241 LYAHSVLPDN IYRHQWQPHD LVFWDNRSLI HLAAGCPSHL RRKLYRTTIQ GDAPY

Type	Start	End	Confidence
Signal Peptide	1	14	0.81
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	295	0.99