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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70733401, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDLANSTMT TTSPPKRIDF NTPELQRKRR IRALKDRLTR WYVLVGGLAV LGAITLIFFF  60
   61 LAYVVAPLFQ GAELTAKDPL TPAWMQDAGK PLMFSLEEQN QVGMRVSDKG QALFFDIDSG 120
  121 AELRKVDLPI PAGASVTSIG KDQPGNPLVV VGLSNGQALV FRHTYKVSYP DGKKTISPAI 180
  181 EYPYGETPIT LNEQGGALEH VNLNATDSSL IVAGSTASQL QVLKLTREEN MMTGEVTSEQ 240
  241 SRIELPQMTE PVKAMYIDPR QQWLYVINGR AQADVFSLRD KSLNGRYKLL EDADTEVTAS 300
  301 TQLVGGISLI IGTSKGGLAQ WFMARDPDGE LRLKQIRTFQ MGTAPIVEIT AEERRKGFVA 360
  361 LDAAGKLGVF HSTAHRTLLV DQVVDGQGLF GLSPRANRVI VEAGGKLQPL VLDNPHPEVS 420
  421 WSALWSKVWY ENYDEPKYVW QSTAANTDFE PKLSLSPLTF GTLKAAFYAM LLAAPLAVAA 480
  481 AIYTAYFMAP GMRRKVKPVI ELMEAMPTVI LGFFAGLFLA PYVEGHLPGI FSLLLLLPIG 540
  541 ILVAGFAWSR LPESLRLKVP DGWESAILIP VIIFVGFLSL YMSPFMENWF FGGDMRMWIS 600
  601 HDLGITYDQR NALVVGLAMG FAVIPNIYSI AEDAVFSVPR GLTLGSLALG ATPWQTMTRV 660
  661 VILTASPGIF SALMIGMGRA VGETMIVLMA TGNTPVMEMN LFEGLRTLAA NVAVEMPESE 720
  721 VGGSHYRVLF LSALVLLLFT FVMNTLAELI RQRLRKKYSS L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle