YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68347621, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVLVLGSGV IGTTSAYYLA RAGFEVTVVD RQPAAAMETS FANAGQVSPG YASPWAAPGV  60
   61 PLKAIKWLLQ RHAPLAIKAT ADIDQYLWMA QMLRNCTASR YAVNKERMVR LSEYSRDCLD 120
  121 ELRAETGIAY EGRSLGTTQL FRTQAQLDGA AKDIAVLKES GVPFELLDRE GIARVEPALA 180
  181 NVTDILAGAL RLPNDQTGDC QIFTTRLAEM ASKLGVEFRF GQDIQRIDFA GDRINGVWID 240
  241 GKLETADRYV LALGSYSPQL LKPLGIKAPV YPLKGYSLTV PITNPAMAPT STILDETYKV 300
  301 AITRFDNRIR VGGMAEIAGF DLSLNPRRRE TLEMIVNDLY PQGGDLSQAS FWTGLRPTTP 360
  361 DGTPIVGATP FRNLFLNTGH GTLGWTMACG SGRLLADLMA KKKPQISAEG LDISRYGNPQ 420
  421 ESAKHVNPAP AHQ

Type	Start	End	Confidence
Signal Peptide	1	16	0.91
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	433	0.98