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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70733259, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALALQANG ISHRYGSQQA LSDISFNLPA GTRCGLIGPD GAGKSSLLGL IAGVKKLQQG  60
   61 ELDVLGGPIS QRRHRSSLYP RVAFMPQGLG GNLYPELSIS ENIRFFATLF GLPKDECEQR 120
  121 MHSLLLATDL LRFAERPAGK LSGGMKQKLG LCCALIHEPD LLILDEPTTG VDPLSRRRFW 180
  181 ELVEDVRRQR PQLTLLVATA YMEEAEQFEH CLMLDQGKLI AQGLSQELAQ ITASGKLDDA 240
  241 FTHFQGDSGH DNQPLVIPPR SGDNQDIAIE AHELTLRFGD FTAVNKVSFA IGRGEIFGFL 300
  301 GSNGCGKTTT MKVLTGLMPA SEGSAKLLGN PVDAKDLATR KRVGFMSQSF SLYGELSVRQ 360
  361 NLELHARLFD LPKAESGPRI EELIQRFDLG AIAEQQSGAL PLGLRQRLSL AVAVLHRPEV 420
  421 LILDEPTSGV DPAARDDFWR LLIELSREQG VTIFLSTHFM NEAQRCDRIS LMHAGKVLAC 480
  481 DTPAALQQQF AGDTLEAAFV RCLEEAQGTP DTPAPSPEAA TPTAAGTLAA PRSGLSLARL 540
  541 LAVASREGKE LLRDKVRLGF ALLGAIFMMV IFGYGISLDV EKLAFAVYDQ DQTPQSRTYL 600
  601 EAFRSSRYFE EKPTIRSSAE LHRRLQRSEI KLALEIPPGF GRDLYAGRQP AVAAWLDGGM 660
  661 PFRAETSRNY VEAVHQANLE LLAEQSSPAL STRPAAKLET RFRYNQDVVS VNAIGPGVMA 720
  721 LILAFIPAML TALGIVREKE LGSITNFYAT PLTRLEFLLG KQAPYLAVSL INLALLVAMN 780
  781 RWLFGVPFKG SGLTLALGGV LYVLATTSMG LLISAFTRTQ IAAILGTMII TSLPTIQFSG 840
  841 LIVPRSSLEG SAAVMGQLFP AGYFLDIAVG TFTKALDLRE LWPQCLALVG FFLGFTGLSL 900
  901 VMLKKQEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle