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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70732757, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQPIRIKDH EKDARLVRGR VVFGAIMVVC LIGVLIARLY YLQVIQYDYH STLSENNRVH  60
   61 VQPIPPTRGL IFDRNGVVVA DNRPSFSLSM TRERSGDWQQ VLDVIVEVLE LTPEDRVLFE 120
  121 KRMKQGRRPF EPVPILFELT EEQIARIAVN QFRLPGVEVV AQLVRHYPQG AHFAHSVGYM 180
  181 GRINEKELKS LDPVNYSGTH HIGKTGIERF YEPELHGQVG YEEVETNARG RVLRVLKRTD 240
  241 PIPGKDIVLS LDIKLQEAAE LALGGRRGAV VALDPSTGEV LAMVSQPSFD PNLFVTGISF 300
  301 KAYAELRDSI DRPLFNRVLR GLYPPGSTIK PAVAIAGLDA GVVTASTRVY DPGYYQLPNY 360
  361 DHKYRNWNRT GDGYVDLDTA IMRSNDTYFY DLAHKLGIDR LSAYMSKFGI GQKVSLDMFE 420
  421 ESPGLMPTRE WKRATRRQAW FPGETLILGI GQGYMQSTPL QLAQATALVA SKGKWNRPHL 480
  481 AKSIEGEKPV DHNPMPDIVL RDPSDWTKVN HGMQQVMHGA RGTARKAAAG SPYRIAGKSG 540
  541 TAQVVAIKQG EKYDRSKVQE RHRDHALFVG FAPAENPKIV VSVMVENGES GSGVAAPVVR 600
  601 QVMDAWLLGQ DGQLKPEFAS PISAEATARE E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle