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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70732567, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRTRSPRSA KKTPSGGLRP WLGWALKLSL VGLVVLAGFA VYLDAVVQEK FSGKRWTIPA  60
   61 KVYARPLELF VGQKLSKDDF LTELDALGYR RESVANGPGA ASVNGNTVDL NTRGFQFYEG 120
  121 LEQAQPVRVR FSGDYVAELS GSKGAKLAVV RLEPLLIGGL YPKNLEDRIL IKIDQVPPYL 180
  181 LETLVAVEDR DFYSHHGVSP KSIARAIWVN TSSGQMRQGG STLTQQLVKN FFLTNERSLS 240
  241 RKLNEAMMAL LLELHYDKRE ILEAYLNEVF VGQDGQRAVH GFGLASQFFF SQPLSELKLH 300
  301 QVALLVGMVK GPSYYNPRRY PERALERRNL VLDLLAQQGV ATPEQVEAAK KMPLGVTKRG 360
  361 SLADSSFPGF LDLVKRQLRE DYRDEDLTEE GLRIFTSFDP ILQMKAEASV NDTFKRLAGR 420
  421 KGSEDVEAAM VVTNPETGEV QAMIGSRQAS FAGFNRALDA VRPIGSLIKP AVYLTALEKP 480
  481 SQYTLTSWLS DEAFSVKGAD GQVWKPQNYD RRSHGTVFLY QGLAHSYNLS TARLGLEVGV 540
  541 PNVLKTLGRL GVTREFPAFP SMLLGAGGMS PMEVATMYQT LANGGFNTPM RGIRSVLTAE 600
  601 GEPLKRYPFQ IQQRFDAGSI YLIQSAMQRV MREGTGSSVY NVLPKTLALA GKTGTSNDSR 660
  661 DSWFAGFSQD LLAVVWLGRD DNGKTPFTGA TGALQVWTSF MRKADPLPLD MPQPDNVVQA 720
  721 WVDSRTGQGS DANCPGAVQM PYIRGSEPPP GASCGGENPA GGDSVMDWVK GWMN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle