YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70732104, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAKRRSNAR PARAWPTCLS RGSSAVKRVH VAAAVIRDAS GKILIARRAD TQHQGGLWEF  60
   61 PGGKVEPGEA VEAALARELQ EELGIAVTAA RPLIKVQHDY PDKQVLLDVW EVSAFSGEPH 120
  121 GAEGQPLAWV TARELADYEF PAANQPIVAA ARLPAQYLIT PEGLETPTLL RGMQKAVAQG 180
  181 CKLIQLRAPG GYDPQYRDLA VDAVGLCAGK AQLMLKGPFE WLGDFPSAGW HITAAQLRKY 240
  241 ASAGRPFGKD RWLAASCHNA EELSLAQQMD VDFVTLSPVQ PTQTHPDAQP LGWQQAEQLI 300
  301 SGFNKPVYLL GGVGPAECQQ AWAAGAQGVA GIRAFWPQD

Type	Start	End	Confidence
Signal Peptide	1	25	0.81
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	339	0.99