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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68346058, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.31
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSSGLIAA VALAYMAIMF AIAFYGDRRS APLPPRVRAW VYSLSLAVYC TSWTFFGAVG  60
   61 QAAEQLWAFL PIYLGPILLL VFAPWVLQKM VMISKQENIT SIADFIAARY GKSQSLAVVV 120
  121 ALICLVGVLP YIALQLKGIV LGVNLLIGAG ADAMGTRAQD TALIVSLILA LFTIVFGTRN 180
  181 LDATEHHRGM VLAIAFESLV KLFAFLAVGA FVTFGLYDGF DDLFNQAMLA PRLEQYWKET 240
  241 INWPSMVVQT GVAMMAIICL PRQFHVTVVE NIEPQDLRLA KWVFPAYLAL AALFVVPIAL 300
  301 AGQMLLPSSV LPDSFVISLP LAQAHPALAL LAFIGGASAA TGMVIVASVA LSTMVSNDML 360
  361 LPWLLRHKNA ERPFEVFRHW MLSVRRVSIV VILLLAYVSY RLLGSTASLA TIGQIAFAAV 420
  421 TQLAPAMLGA LYWKQANRRG VFAGLAAGTF IWFYTLILPI AAHSLGWSLS SFPGLAWLHG 480
  481 NPLNLPITPL TQGVVLSLAG NFTLFAWVSV LSRTRVSEHW QAGRFIGQEI SGRLSSRSML 540
  541 AVQIDDLLKL AARFVGEERA RQSFIRFAYR QGKGFNPNQN ADGEWIAHTE RLLAGVLGAS 600
  601 STRAVVKAAI EGREMQLEDV VRIADEASEV LQFNRALLQG AIENITQGIS VVDQSLKLVA 660
  661 WNRRYLELFN YPDGLISVGR PIADIIRHNA ERGLCGPGEA EVHVARRLHW MRQGRAHTSE 720
  721 RLFPNGRVIE LIGNPMPGGG FVMSFTDITP FREAEQALTE ANEGLEQRVA ERTHELSQLN 780
  781 AALTEAKGTA EAANQSKTRF LAAVSHDLMQ PLNAARLFSA ALSHQDDGLS AEAQQLVQHL 840
  841 DSSLRSAEDL ISDLLDISRL ENGKITPDRK PFALNELFDT LGAEFKALAQ EQGLQFRVRG 900
  901 SHLRIDSDSK LLRRVLQNFL TNAFRYAKGP VLLGVRRRGE TLSLEVWDRG PGIPQDKQQV 960
  961 IFEEFKRLDS HQTRAEKGLG LGLAIADGLC RVLGHPLQVR SWPGKGSVFS VSVPLARSSV1020
 1021 VAPGKAAELN GQSLNGGQVL CVDNEDSILI GMNSLLTRWG CQVWTARNRE ECAALLKEGI1080
 1081 RPQLALVDYH LDNGETGTEV MAWLRTQLGE PVPGVVISAD GRPEMVAQVH AAGLDYLAKP1140
 1141 VKPAALRALL SRHLPLG

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