YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70731601, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPSLFISHG SPMLALEPGA SGPALARLAA ELPRPRAILV VSAHWESSDL RVSCNPHPET  60
   61 WHDFGGFPAA LFAVQYPAPG DPELAAQVVE LLQAEGLPAQ LDSQRPFDHG TWVPLSLMYP 120
  121 QADIPVVQLS LPSRLGPALQ TRIGHALAGL REQGVLLIGS GSITHNLRDL DWQAGPESVE 180
  181 PWAKAFRDWM IDKLAADDQA ALHDYRQQAP NAVRSHPSDE HLLPLYFARG VGGEFSVAHQ 240
  241 GFTLGALGMD IYRFG

Type	Start	End	Confidence
Signal Peptide	1	26	0.93
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	255	0.99