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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70731369, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARELARTGL HSSPSASRFI SNKRLKNAIG RPLQCKVSDI YRIKDVSMSL RQLSIQWKIT  60
   61 LLAGLCLLGI VSLLVGLSLY RMEHSSELVK ASSMEMLNEA AQARIEAQGE VQALGIRQQF 120
  121 MDAYQYGHGF SRQVLFLREQ AEKRFLDAFD LREDLTRQVK SALQANPDLL GLSLVFEANA 180
  181 LDGKDELFGG QSELGSNEKG RFALYWSQPT PGKLTSMSLP ESDMSDTRTG PSGQPANAWF 240
  241 TCPRSTLKPC VIEPYFYDID GQKVLMTSIV FPLMVDGKVI ASLSVDINLN SLQAISQSAS 300
  301 KRLYAGQTNV SILSPVGLLA GYSPDASKLS QRLDSVDTTN GAELIRLLAN STQTQSLHSN 360
  361 RELKVLAPFT PIPGGKAWGV LLDVPEKVLV GPAEALKSEL DARNNSGTLI ELGLGLLAAV 420
  421 VGLLLVWLMA RSVTRPILGV AHMLEDIASG EGDLTRRLAY DKPDELGQLA GWFNRFLDKL 480
  481 QPIIAEVKRS VQDARGTADQ SSAIATQTSA GMEQQYRQVD QVATASHEMS ATAQDVARSA 540
  541 AQAAQAARDA DQATRQGLNV IDHTTRSIDL LAADMSAAMT QVEGLAANSE QIGSVLEVIR 600
  601 SIAEQTNLLA LNAAIEAARA GEAGRGFAVV ADEVRNLAQR TQESVEETRQ VIEQLQNGTR 660
  661 EVVGSMNNSH RQAQGSVEQV GQAVTALRQI GDAVTVISDM NLQIASAAEQ QSAVAEEINS 720
  721 NVATIRDVTE SLSEQANESA RVSQSLNSLA NQQQSLMDQF RV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle