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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68343329, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAVADNVP AKAAPIDGKP PLFGLSFLEN LSQMTMLRQV GLLVGLAASV AIGFAVVLWS  60
   61 QQPDYRPLYG SLAGMDAKQV MDTLASADIP YTVEPNSGAL LVKADDLSRA RLKLAAAGVA 120
  121 PGDGNVGFEI LDKEQGLGTS QFMEATRYRR GLEGELARTI SSLNNVKGAR VHLAIPKSSV 180
  181 FVRDERKPSA SVLVELYSGR SLEPGQVMAI VNLVATSVPE LNKSQVTVVD QKGNLLSDQA 240
  241 ENSALTMAGK QFDYSRRLEG MLTQRVHNIL QPVLGNDRYK AEVSADVDFS AVESTSEQFN 300
  301 PDQPALRSEQ SVNEQRSSSN GPQGVPGALS NQPPAPASAP QTTGGATAAA GMVQPGQPLL 360
  361 DANGQQIMDP ATGQPMLAPY PSDKRQQSTK NFELDRSISH TKQQQGRLNR LSVAVVVDDQ 420
  421 VKVNPANGET SRAPWSADEL ARFTRLVQDA VGFDASRGDS VSVINVPFSA ERGEVIADIP 480
  481 FYSQPWFWDI VKQVLGVLFI LVLVFGVLRP VLNNITGGGK NKELAGLGSD VELGGMGGLD 540
  541 GELGNDRVSL GGPQSILLPS PSEGYDAQLN AIKSLVAEDP GRVAQVVKEW INADE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle