YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68342856, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLKTLLAH RRPSLAHAGF RAISVFIAPL GVKRACMTVT LKTPEDIAKM RVAGKLAADV  60
   61 LEMIAEHVKP GVTTEELDRI CHDYIVNVQG AIPAPLNYKG FPKSICTSIN HVVCHGIPNE 120
  121 KPLKDGDTLN IDVTVIKDGY HGDTSRMFHV GTVPVWAERL SQITQECMYK AIELVKPGCR 180
  181 LGDIGEVIQK HAEKNGFSVV REFCGHGIGK VFHEEPQILH YGRAGTGMEL KAGMTFTIEP 240
  241 MINQGKADTK VLGDGWTAIT KDRKLSAQWE HTLLVTETGY EIFTLRSDDT IARVSA

Type	Start	End	Confidence
Signal Peptide	1	34	0.64
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	296	0.99