YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70728452, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLNFPLLLV IAVFVCGLLA LLDLVFLAPR RRAAIANYQG SVSQPDGVVV EKLSKEPLLV  60
   61 EYGKSFFPVL FIVLVLRSFL VEPFQIPSGS MKPTLDVGDF ILVNKFSYGI RLPVIDKKVI 120
  121 EVGDPQRGDV MVFRYPSDPN VNYIKRVVGL PGDEVRYTSD KHLFVNGQPV AEQLVGAEPG 180
  181 TLGSAELYKE KLGAAEHLIR KEMSRYRATP DGRWVVPAGH YFMMGDNRDN SNDSRYWDDP 240
  241 SIPKDLLGMV PDKNIVGKAF AVWMSWPEPK LSHLPNFSRV GLIK

Type	Start	End	Confidence
Signal Peptide	1	27	0.73
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	284	0.90