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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74193348
Protein type: Globular with Signal Peptide
Type Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPRRPASLE VTVACIWLLT VILGVCISFN VDVKNSMSFS GPVEDMFGYT VQQYENEEGK  60
   61 WVLIGSPLVG QPKARTGDVY KCPVGRERSM PCVKLDLPVN TSIPNVTEIK ENMTFGSTLV 120
  121 TNPKGGFLAC GPLYAYRCGH LHYTTGICSD VSPTFQVVNS FAPVQECSTQ LDIVIVLDGS 180
  181 NSIYPWESVT AFLNDLLKRM DIGPKQTQVG IVQYGANVTH EFNLNKYSST EEVLVAANKI 240
  241 GRRGGLQTMT ALGIDTARKE AFTEARGARR GVKKVMVIVT DGESHDNYRL KQVIQDCEDE 300
  301 NIQRFSIAIL GHYNRGNLST EKFVEEIKSI ASEPTEKHFF NVSDELALVT IVKALGERIF 360
  361 ALEATADQSA ASFEMEMSQT GFSAHYSQDW VMLGAVGAYD WNGTVVMQKA NQIVIPHNTT 420
  421 FQTEPTKMNE PLASYLGYTV NSATIPGDVL YIAGQPRYNH TGQVVIYKME DGDVNILQTL 480
  481 SGEQIGSYFG SVLTTIDIDK DSYTDLLLVG APMYMGTEKE EQGKVYVYAV NQTRFEYQMS 540
  541 LEPIKQTCCS SLKDNSCTKE NKNEPCGARF GTAVAAVKDL NVDGFNDVVI GAPLEDDHAG 600
  601 AVYIYHGSGK TIRKEYAQRI PSGGDGKTLK FFGQSIHGEM DLNGDGLTDV TIGGLGGAAL 660
  661 FWARDVAVVK VTMNFEPNKV NI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle