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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|70606884, gi|...
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVEDIKKIL VIGAGTMGHG IAELAAIAGY QVYLSDVSQD ILNSAMDKVK WSLTKLKERG  60
   61 TIKEDVETVL QRIRPVVGLD KTVSDADFSI EAITEKIDVK RQTFAKLDEL LPPHAILATN 120
  121 TSSLPVSKIA EATKRPDKVV GMHYFNPPAL MPLVEVMKGD KTSDETAKVT YELAKKLGKQ 180
  181 PIMINKDIPG YVVNRILGGI NIASCIVVEK KLADIKEVDA VARYKLGFPM GVFELLDYTG 240
  241 IDVAYYISKS REELGVKDDI PICSLIVEKF KNNELGVKSG KGFYTYPGPG KYVKPELPKE 300
  301 LAEKLNPALI IAPAVNEAAR LVRENIASKE DVDLGTVLGL GFQKGILKLA DEVGIDNIVN 360
  361 SLSELKKLTG ISSFDPDPLL TEMVSQGKVG MKSGSGFFEY GKIQQKTLKT LILRVEPPLA 420
  421 WIVLNRPERL NALSQELMGE LDKVLDELEF NNDVRVVIIT GNGRAFSAGA DVTSFTTLRP 480
  481 IDVVRYRYMK NVIYKIQLYT KPVIAAINGF ALGGGLELAM ACDIRIASNL AQLGQPEINI 540
  541 GIIPGAGGTQ RLPRLIGKGR AKLLIYTGDM IPAEEAYKMG LVDQVVPANK FEEEVRRVAL 600
  601 KIAEKSPLSL LAAKLAVELG YEANIWTGQE LESALFGLLF TTEDVKEGVR AFLERRKPQF 660
  661 KGE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle