YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|58476469
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFCNLLLLT TVFLTLWFTT SKGEGIACKP PYIPNGIYSP HKINYTIDDE IKYECKNGFY  60
   61 PATKGTVAKC TSTGWIPLPR CSLKPCDFPQ FKHGRLYYEE SRRPYFPVPI GKEYSYYCDN 120
  121 GFTTPSQSYW DYLRCTVNGW EPEVPCLRQC IFHYVENGES SYWQRRYIEG QSAKVQCYSG 180
  181 YSLPNGQDTM ICTENGWSPP PKCVRIKSCD MPVFENAVIK NNSTWFKLND KIDYECHDGY 240
  241 ENKYKQTKGS ITCNDDGWSD KPSCYDSTKI CGPPPPIDNG DTTSFPLQRY IPSSSVEYQC 300
  301 QSLYQLQGNK TIICINGEWS DPPKCLHPCI ISKEIMEKHN ITFRWEEKQK RYYQSGETQE 360
  361 FKCKNGHHLA TTQPLITICI NGQINYPTCT KSH

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	393	0.99