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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50841444
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKIGEGIEV REELIKKACN LAMEAHNLSP EKPYIYKKIN GSTDVVFAFA GTLSFDGWYS  60
   61 NTSFGETEIN TTLFPSLRSV GTDEVAKVNE AFARRFQDIL DKSSLKNEVE KAMSKGRHVV 120
  121 FAGHSSGGAI AILAALWCLE CCRTRPEGDM LVHLYCMTFG SPLVGNKIWS HALRRENWAR 180
  181 YFIHFVMKYD IVPRMMLAPL SSIQELLQAI SPFINPKSQY YQRDAVARSS NALNFFMTVM 240
  241 RNASSAASYA ACNLKGCTNL LLETVSNIVQ LSPYIPFGTY IFCTGNRKLV VVENPDAVLQ 300
  301 LLFYSSQLSS EAEAAVVVAR SLNDHLLYTN EMQDSLEMQD VIHLNNLTDI PLSSNVDPSD 360
  361 EVASMNSALN DLGLSTRARL CLRAAGEWEK QKKKNEEKIE QNKSSIRDAL SKIQEYQTKC 420
  421 DIHKVGYYDA FKIQNTDDDF NANVKRHELA GIWNEIIEML KRYELPDSFE GQKDWIELGT 480
  481 QFRRQVEPLD IANYYRHLKN EDSGPYLIRG RPKRYRFTQR WLEHFDKVHA GARSESCFWA 540
  541 EVEELRNKPF AQVQNKILSL ETAANGWIQS SLLGDDVFFP ESTYTKWWKT LPTQHKQTSW 600
  601 VSRKITP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle