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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78369374, gi|...
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMADSNMDA GTTTSEMVAE EVSLFSTTDV ILFSLIVGVM TYWFLFRKKK EEVPEFTKIQ  60
   61 TTTSSVKDRS FVEKMKKTGR NIIVFYGSQT GTAEEFANRL SKDAHRYGMR GMAADPEEYD 120
  121 LADLSSLPEI EKALAIFCMA TYGEGDPTDN AQDFYDWLQE TDVDLSGVKY AVFALGNKTY 180
  181 EHFNAMGKYV DKRLEQLGAQ RIFDLGLGDD DGNLEEDFIT WREQFWPAVC EHFGVEATGE 240
  241 ESSIRQYELM VHTDMDMAKV YTGEMGRLKS YENQKPPFDA KNPFLAVVTT NRKLNQGTER 300
  301 HLMHLELDIS DSKIRYESGD HVAVYPANDS ALVNQLGEIL GADLDIIMSL NNLDEESNKK 360
  361 HPFPCPTSYR TALTYYLDIT NPPRTNVLYE LAQYASEPTE HEQLRKMASS SGEGKELYLR 420
  421 WVLEARRHIL AILQDYPSLR PPIDHLCELL PRLQARYYSI ASSSKVHPNS VHICAVAVEY 480
  481 ETKTGRINKG VATSWLRAKE PAGENGGRAL VPMYVRKSQF RLPFKATTPV IMVGPGTGVA 540
  541 PFIGFIQERA WLRQQGKEVG ETLLYYGCRR SDEDYLYREE LAGFHKDGAL TQLNVAFSRE 600
  601 QPQKVYVQHL LKKDKEHLWK LIHEGGAHIY VCGDARNMAR DVQNTFYDIV AEQGAMEHAQ 660
  661 AVDYVKKLMT KGRYSLDVWS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle