YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86558065, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNLDTSQVS LSREEMERFS RHLILPEVGL EGQKRLKAGK VLCIGTGGLG SPLLLYLAAA  60
   61 GVGRIGIVDF DVVDVSNLQR QVIHGTSWVG KPKVESAKNR ILEINPHCQV DVYNTALKAH 120
  121 NALELFANYD VIVDGTDNFP TRYLVNDACV LTGKPNVYGS IFRFEGQATV FNYEDGPNYR 180
  181 DLYPEPPPPG LVPSCAEGGV LGILPGIIGV IQATETVKIL LGVGTTLSGR LLLYDALNMS 240
  241 FRELKLRKNP ATPPITQLID YEQFCGIPPA QATEQAGQTE IPEITVAELK ARMDAHQDFV 300
  301 LVDVRNPNEW EIGRIPGAHL IPLPQIENGD GVEQVRRLLN GSELIVHCKS GARSAKALKI 360
  361 LQAAGIQGKN LRGGILAWAE AYDPSIPKY

Type	Start	End	Confidence
Cytoplasmic	1	40	0.58
Transmembrane Helix	41	60	0.55
Non-Cytoplasmic	61	389	0.94